I'm kind of getting what you are saying there. I'm not to good with the numbers behind it. I myself can just imagine how it could look already done i the game(daydreaming). What the mana/chakra system could do is to make it more dramatic. And yes the thing about it getting easier to cast the jutsu the higher level you get, if I got that one right?
I dont think easier is the right word... More Efficient is a better way to describe it... But the key to the system is Stamina, and How It affects PE. PE is key to taijutsu and where the majority of the energy for Ninjutsu and Genjutsu should comes from I think. For this an accurate system for stamina (IF NOT THIS ONE) Is needed. My system Ties Both Stamina and Chakra together in a accurate and Logical way... At least to me. If Jutsu were real It would take all your PE(energy in your whole body)when you first learn how, to make something like a Shadow Clone(for example) of yourself. You're basically turning energy into something solid-IE Mater, Einstein proved this was posable years ago. However where we diverge from reality is the amount of energy needed. Being able to Train in chakra control allows you to reduce the energy consumption and Lets you Fight longer with more energy than someone with out this training.
The higher the stamina- the more times you can use All the energy from your whole Body At one time. So stamina affects How Much chakra you can use Because of How stamina affects your PE.
This is why you can say someone with a lot of stamina has a lot of chakra(trains only in stamina with basic chakra control) But Someone with a lot of chakra may not have a lot of stamina(only trains in chakra control with basic stamina.)Someone like naruto that has a lot of stamina and Masters chakra control becomes extremely Powerful in terms of the amount of chakra they can whiled. This is why i recommended Not allowing People to Train Both. Or If They can It should Take Years Of Play To achieve the Max Level In Both. Because If Some one Masters Both Training There Would be NO JUTSU THEY COULD NOT USE!!!
IF I WAS TO INCLUDE SAGE MODE IN THIS IT WOULD BE A LEVEL HIGHER THAN THE NORMAL MAX LEVEL CHAKRA CONTROL.
SO NORMAL CHAKRA CONTROL
(3906 x PEU )+(SE x SEU))cc level mod=sum- desired chakra in bar. Num lock or caps key( can be pushed and left on in battle and turned off when chakra is full.
SAGE CHAKRA WOULD LOOK LIKE THIS
(3906 x PEU)2+(SE x SEU)CC Mod=Sage Chakra - must be standing still and must hold shift~ till you fill sage chakra-make the color of the normal chakra bar Purple mixing red nature energy into your Blue chakra.It would boost the Total chakra IN your bar and give you sertan buffs such as not using chakra to do 60k run and double jumps, and small buff to strangth,but only while the chakra is in your body.
As you use the sage chakra for jutsu and the like-The buff decreases by the same rate.
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